PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68402.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 93aa    MW: 10382.8 Da    PI: 8.5247
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68402.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.71.5e-0624611854
                HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +  ++L +llP+ + + +s Kls   +L+++++YI++L
  EPS68402.1 24 ELVSKLHQLLPEiRANRGSNKLSANKVLQETCNYIRDL 61
                55689*******999999******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.067661IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.6E-72165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.01E-62280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
MSGRRSRQTG SNGAGRITDD QIIELVSKLH QLLPEIRANR GSNKLSANKV LQETCNYIRD  60
LHKEVIDLSE RLSQLLSTID SDSPEAAIIR NLI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006357115.13e-45PREDICTED: transcription factor PRE6-like
SwissprotQ9LJX11e-39PRE5_ARATH; Transcription factor PRE5
TrEMBLS8E7M53e-61S8E7M5_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000177489e-45(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35324161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.16e-41bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]